{"id":2771,"date":"2015-03-19T16:17:27","date_gmt":"2015-03-19T15:17:27","guid":{"rendered":"http:\/\/trigenotoul.com\/?p=2771"},"modified":"2015-03-19T16:17:27","modified_gmt":"2015-03-19T15:17:27","slug":"spim-macro","status":"publish","type":"post","link":"https:\/\/trigenotoul.com\/en\/macro-spim\/","title":{"rendered":"Macro-SPIM: A new imaging tool"},"content":{"rendered":"<p><img fetchpriority=\"high\" decoding=\"async\" class=\"alignleft wp-image-5818\" src=\"https:\/\/trigenotoul.com\/wp-content\/uploads\/2015\/03\/macroSPIM-1-450x300.jpg\" alt=\"\" width=\"367\" height=\"272\" \/><\/p>\n<p style=\"text-align: justify;\">One of the challenges in biological imaging is to visualise biological structures and living organisms in three dimensions and in depth. After developing a first light-sheet microscope, the SPIM (Selective Plane Illumination Microscope), the Restore imaging platform is acquiring a variant of this device, the <strong>macro-SPIM<\/strong>.<\/p>\n<p style=\"text-align: justify;\">Just like its cousin, the SPIM, it allows for rapid, 3D and in-depth optical sectioning of a sample, whilst offering multi-view acquisition capabilities. Furthermore, unlike all the 3D imaging tools available on the market, image reconstructions obtained by light-sheet microscopy are free from any optical distortion. Conversely, unlike the SPIM, which is restricted to small samples (from a hundred micrometres to a millimetre), the macro-SPIM allows for acquisitions with large samples (on the scale of a centimetre), such as whole organs. Naturally, these organs must first undergo a \u00abtissue clearing\u00bb treatment.<\/p>\n<hr \/>\n<p style=\"text-align: justify;\">It was a collaboration with Restore that brought the need to light. Confocal microscopy was used at the time, but the very long acquisition times constituted a serious obstacle... which has now been overcome thanks to this new resource.<\/p>\n<ul>\n<li><strong>Contact: <span id=\"cloak94002\"><a href=\"mailto:Jacques.ROUQUETTE@cnrs.fr?subject=Macro-SPIM\">Jacques Rouquette<\/a><\/span><\/strong><\/li>\n<li><strong><a href=\"https:\/\/vm-tridb.toulouse.INRAe.fr\/\" target=\"_blank\" rel=\"noopener\">Direct booking<\/a><\/strong><\/li>\n<\/ul>","protected":false},"excerpt":{"rendered":"<p>L\u2019un des challenges en imagerie\u00a0 biologique est de visualiser en trois dimensions et en profondeur des structures biologiques et des organismes vivants. Apr\u00e8s avoir d\u00e9velopp\u00e9 un premier microscope \u00e0 feuille de lumi\u00e8re, le SPIM (Selective Plane Illumination Microscope), la plateforme d\u2019imagerie de Restore se dote d\u2019une d\u00e9clinaison de cet appareil, le macro-SPIM. Tout comme son [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":2987,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":""},"categories":[1],"tags":[],"class_list":["post-2771","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-actualites-fr"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v28.5 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Macro-SPIM : Un nouvel outil d&#039;imagerie - TRI-Genotoul<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/trigenotoul.com\/en\/spim-macro\/\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Macro-SPIM : Un nouvel outil d&#039;imagerie - TRI-Genotoul\" \/>\n<meta property=\"og:description\" content=\"L\u2019un des challenges en imagerie\u00a0 biologique est de visualiser en trois dimensions et en profondeur des structures biologiques et des organismes vivants. 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Tout comme son [&hellip;]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/trigenotoul.com\/en\/spim-macro\/\" \/>\n<meta property=\"og:site_name\" content=\"TRI-Genotoul\" \/>\n<meta property=\"article:published_time\" content=\"2015-03-19T15:17:27+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/trigenotoul.com\/wp-content\/uploads\/2015\/03\/macrospim1-1.jpg\" \/>\n\t<meta property=\"og:image:width\" content=\"663\" \/>\n\t<meta property=\"og:image:height\" content=\"533\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/jpeg\" \/>\n<meta name=\"author\" content=\"gesteve\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"gesteve\" \/>\n\t<meta name=\"twitter:label2\" content=\"Estimated reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\\\/\\\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/#article\",\"isPartOf\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/\"},\"author\":{\"name\":\"gesteve\",\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/#\\\/schema\\\/person\\\/71018a7e00cf92ab28949e5339a08591\"},\"headline\":\"Macro-SPIM : Un nouvel outil d&rsquo;imagerie\",\"datePublished\":\"2015-03-19T15:17:27+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/\"},\"wordCount\":223,\"publisher\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/#organization\"},\"image\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/#primaryimage\"},\"thumbnailUrl\":\"https:\\\/\\\/trigenotoul.com\\\/wp-content\\\/uploads\\\/2015\\\/03\\\/macrospim1-1.jpg\",\"articleSection\":[\"Actualit\u00e9s\"],\"inLanguage\":\"en-GB\"},{\"@type\":\"WebPage\",\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/\",\"url\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/\",\"name\":\"Macro-SPIM : Un nouvel outil d'imagerie - TRI-Genotoul\",\"isPartOf\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/#website\"},\"primaryImageOfPage\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/#primaryimage\"},\"image\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/#primaryimage\"},\"thumbnailUrl\":\"https:\\\/\\\/trigenotoul.com\\\/wp-content\\\/uploads\\\/2015\\\/03\\\/macrospim1-1.jpg\",\"datePublished\":\"2015-03-19T15:17:27+00:00\",\"breadcrumb\":{\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/#breadcrumb\"},\"inLanguage\":\"en-GB\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/\"]}]},{\"@type\":\"ImageObject\",\"inLanguage\":\"en-GB\",\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/#primaryimage\",\"url\":\"https:\\\/\\\/trigenotoul.com\\\/wp-content\\\/uploads\\\/2015\\\/03\\\/macrospim1-1.jpg\",\"contentUrl\":\"https:\\\/\\\/trigenotoul.com\\\/wp-content\\\/uploads\\\/2015\\\/03\\\/macrospim1-1.jpg\",\"width\":663,\"height\":533,\"caption\":\"macrospim\"},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/macro-spim\\\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Accueil\",\"item\":\"https:\\\/\\\/trigenotoul.com\\\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Macro-SPIM : Un nouvel outil d&rsquo;imagerie\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\\\/\\\/trigenotoul.com\\\/#website\",\"url\":\"https:\\\/\\\/trigenotoul.com\\\/\",\"name\":\"TRI-Genotoul\",\"description\":\"Imagerie, cytom\u00e9trie &amp; 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